myPhyloDB v.1.1.2 is a user-friendly personal database with a browser-interface 
designed to facilitate the storage, processing, analysis, and distribution of 
microbial community populations (e.g. 16S metagenomics data). MyPhyloDB archives 
raw sequencing files, and allows for easy selection of project(s)/sample(s) of 
any combination from all available data in the database. The data processing 
capabilities of myPhyloDB are also flexible enough to allow the upload and 
storage of pre-processed data, or use the built-in Mothur pipeline to automate 
the processing of raw sequencing data. myPhyloDB provides several analytical 
(e.g. analysis of covariance,t-tests, linear regression, differential abundance 
(DESeq2), and principal coordinates analysis (PCoA)) and normalization 
(rarefaction, DESeq2, and proportion) tools for the comparative analysis of 
taxonomic abundance, species richness and species diversity for projects of 
various types (e.g. human-associated, human gut microbiome, air, soil, and 
water) for any taxonomic level(s) desired. Finally, since myPhyloDB is a local 
web-server, users can quickly distribute data between colleagues and end-users 
by simply granting others access to their personal myPhyloDB database. myPhyloDB 
is available 
athttp://www.ars.usda.gov/services/software/download.htm?softwareid=472 and more 
information along with tutorials can be found on our 
websitehttp://www.myphylodb.org. Database URL:http://www.myphylodb.org.