lsr:ddanat
type: Ontology
format version [obo_vocabulary:format-version]: 1.2
date [obo_vocabulary:date]: 15:01:2013 16:40
saved by [obo_vocabulary:saved-by]: pfey
auto generated by [obo_vocabulary:auto-generated-by]: OBO-Edit 2.2
default namespace [obo_vocabulary:default-namespace]: Dictyostelium_discoideum_anatomy

format version [obo_vocabulary:format-version]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: format-version
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: format version
type: DatatypeProperty

Bio2RDF namespace
type: DatatypeProperty

Bio2RDF identifier
type: DatatypeProperty

Bio2RDF uri
type: DatatypeProperty

identifiers.org URI
type: ObjectProperty

Provider URI
type: ObjectProperty

date [obo_vocabulary:date]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: date
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: date
type: DatatypeProperty

saved by [obo_vocabulary:saved-by]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: saved-by
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: saved by
type: DatatypeProperty

auto generated by [obo_vocabulary:auto-generated-by]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: auto-generated-by
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: auto generated by
type: DatatypeProperty

default namespace [obo_vocabulary:default-namespace]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: default-namespace
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: default namespace
type: DatatypeProperty

vegetative amoebae [ddanat:0000002]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000002
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: vegetative amoebae
type: Class
description: Unicellular haploid myxamoebae that feeds on bacteria by phagocytosis and divides by binary fission. The size of vegetative cells range from 12-20 microns by 8-12 microns. The cells exhibit a roughly rounded but rather irregular shape. [DDB:pg, DDB_REF:5048, PMID:4338436]
broad_synonym [obo_vocabulary:broad_synonym]: amoebae
exact_synonym [obo_vocabulary:exact_synonym]: vegetative cell
exact_synonym [obo_vocabulary:exact_synonym]: vegetative cell (sensu Mycetozoa)
x cl [obo_vocabulary:x-cl]: cl:0000263
subclass of: Dictyostelium discoideum single cell organism [ddanat:0000083]
develops_from [obo_vocabulary:develops_from]: spore [ddanat:0000414]
part_of [obo_vocabulary:part_of]: stream [ddanat:0000013]

broad_synonym [obo_vocabulary:broad_synonym]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: broad_synonym
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: broad_synonym
type: DatatypeProperty

exact_synonym [obo_vocabulary:exact_synonym]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: exact_synonym
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: exact_synonym
type: DatatypeProperty

x cl [obo_vocabulary:x-cl]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: x-cl
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: x cl
type: ObjectProperty

cl:0000263
Bio2RDF namespace: cl
Bio2RDF identifier: 0000263
identifiers.org URI: http://identifiers.org/cl/0000263
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

Dictyostelium discoideum single cell organism [ddanat:0000083]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000083
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: Dictyostelium discoideum single cell organism
type: Class
description: Cell that is an individual member of the species Dictyostelium discoideum. [CARO:MAH, DDB:PG]
exact_synonym [obo_vocabulary:exact_synonym]: Dictyostelium discoideum single cell organism
x caro [obo_vocabulary:x-caro]: caro:0000064
subclass of: cell [ddanat:0000401]

develops_from [obo_vocabulary:develops_from]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: develops_from
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: develops_from
type: ObjectProperty

spore [ddanat:0000414]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000414
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: spore
type: Class
description: Dormant cell protected by a tri-layer spore coat. The spore has an elliptical shape and is approximately 6-9 microns by 3 microns. [DDB:pg, DDB_REF:5048, PMID:4338436]
exact_synonym [obo_vocabulary:exact_synonym]: spore (sensu Mycetozoa)
x cl [obo_vocabulary:x-cl]: cl:0000291
subclass of: Dictyostelium discoideum single cell organism [ddanat:0000083]
develops_from [obo_vocabulary:develops_from]: prespore cell [ddanat:0000405]
part_of [obo_vocabulary:part_of]: sorus of the fruiting body [ddanat:0000070]

part_of [obo_vocabulary:part_of]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: part_of
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: part_of
type: ObjectProperty

stream [ddanat:0000013]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000013
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stream
type: Class
description: Macroscopic appearance of groups of chemotactic cells orienting themselves in a head to tail fashion as they are migrating in the direction of the chemotactic stimulus to form aggregates. [DDB:pg, DDB_REF:5048]
exact_synonym [obo_vocabulary:exact_synonym]: pseudoplasmodial stream
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: aggregation territory [ddanat:0000003]

aggregation territory [ddanat:0000003]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000003
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: aggregation territory
type: Class
description: Area covered by a group of chemotactic cells converging toward the same aggregation center. Can reach a diameter of up to 1 cm. [DDB:pg, DDB_REF:5048, DDB_REF:5054]
subclass of: whole organism [ddanat:0010082]

whole organism [ddanat:0010082]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0010082
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: whole organism
type: Class
description: Anatomical structure that is an individual member of the Dictyostelium discoideum species and consists of more than one cell. [CARO:MAH]
x caro [obo_vocabulary:x-caro]: caro:0000012
subclass of: Dictyostelium discoideum anatomical structure [ddanat:0010001]

loose aggregate [ddanat:0000004]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000004
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: loose aggregate
type: Class
description: First adherent mass of cells observed during development, relatively flat with indistinct borders. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: loose mound
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: aggregation territory [ddanat:0000003]

mound [ddanat:0000005]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000005
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: mound
type: Class
description: Hemispherical structure composed of post-aggregative cells that are undergoing differentiation. [DDB:pg, PMID:52566]
broad_synonym [obo_vocabulary:broad_synonym]: pseudoplasmodium
exact_synonym [obo_vocabulary:exact_synonym]: tight aggrgate
exact_synonym [obo_vocabulary:exact_synonym]: tight mound
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: loose aggregate [ddanat:0000004]

tipped mound [ddanat:0000006]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000006
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: tipped mound
type: Class
description: Hemispherical structure composed of post-aggregative cells that are undergoing differentiation and that have formed a tip. [DDB:pg]
broad_synonym [obo_vocabulary:broad_synonym]: pseudoplasmodium
exact_synonym [obo_vocabulary:exact_synonym]: tipped aggregate
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: mound [ddanat:0000005]

standing slug [ddanat:0000007]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000007
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: standing slug
type: Class
description: Cylindrical structure that is formed by elongation of the mound under the control of the tip. The elongating tip is called the first finger. [DDB:pg]
comment [obo_vocabulary:comment]: Synonym from Kessin book p. 166.
exact_synonym [obo_vocabulary:exact_synonym]: finger
narrow_synonym [obo_vocabulary:narrow_synonym]: first finger
broad_synonym [obo_vocabulary:broad_synonym]: pseudoplasmodium
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: tipped mound [ddanat:0000006]

comment [obo_vocabulary:comment]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: comment
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: comment
type: DatatypeProperty

narrow_synonym [obo_vocabulary:narrow_synonym]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: narrow_synonym
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: narrow_synonym
type: DatatypeProperty

x isbn [obo_vocabulary:x-isbn]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: x-isbn
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: x isbn
type: ObjectProperty

isbn:0521583640
Bio2RDF namespace: isbn
Bio2RDF identifier: 0521583640
identifiers.org URI: http://identifiers.org/isbn/0521583640
type: isbn resource [isbn_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

migratory slug [ddanat:0000008]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000008
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: migratory slug
type: Class
description: When the conditions are not optimal for the completion of development, the standing slug bends from a vertical position to a horizontal position, producing a migratory that slug has the ability to migrate towards more favorable environmental conditions. The slug is cylindrical in shape with a rounded, tapering region at its anterior end that is raised with respect to the substratum. It usually measures between 0.8 to 1.2 mm in length with a diameter of 0.15 to 0.25 mm. Slugs sense and respond to light, temperature and acidity, and do not enter culmination until the conditions are optimal. The slug can move at a speed of 0.5 to 2 mm per hour. A trail of slime is deposited on the surface during migration. [DDB:pg, DDB_REF:439, DDB_REF:5048, DDB_REF:5053, DDB_REF:5054]
broad_synonym [obo_vocabulary:broad_synonym]: pseudoplasmodium
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: standing slug [ddanat:0000007]

early culminant [ddanat:0000009]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000009
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: early culminant
type: Class
description: Structure formed after the arrest of slug migration formed when cells of the posterior region of the slug move under the tip. Stalk tube formation is initiated at this stage. [DDB:5059, DDB:pg, DDB_REF:5048]
broad_synonym [obo_vocabulary:broad_synonym]: culminant
narrow_synonym [obo_vocabulary:narrow_synonym]: mexican hat
broad_synonym [obo_vocabulary:broad_synonym]: pseudoplasmodium
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: standing slug [ddanat:0000007]

mid culminant [ddanat:0000010]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000010
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: mid culminant
type: Class
description: Structure in which stalk tube formation has progressed down the prespore zone. Basal disc formation begins at this stage, with the migration of pstA and pstB cells to the lower part of the culminant to form the basal disc. [DDB:pg, DDB_REF:5059]
broad_synonym [obo_vocabulary:broad_synonym]: culminant
broad_synonym [obo_vocabulary:broad_synonym]: pseudoplasmodium
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: early culminant [ddanat:0000009]

late culminant [ddanat:0000011]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000011
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: late culminant
type: Class
description: Structure in which stalk tube formation has progressed down to the basal disc. The sorogen ascents up the stalk to it apical position dring this stage. Terminal differentiation occurs at this stage: death of the stalk cells and encapsulation of the spores. [DDB:pg, DDB_REF:5059]
comment [obo_vocabulary:comment]: Kessin book p. 201.
broad_synonym [obo_vocabulary:broad_synonym]: culminant
related_synonym [obo_vocabulary:related_synonym]: pseudoplasmodium
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: mid culminant [ddanat:0000010]

related_synonym [obo_vocabulary:related_synonym]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: related_synonym
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: related_synonym
type: DatatypeProperty

fruiting body [ddanat:0000012]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000012
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: fruiting body
type: Class
description: Dicty asexual organism which is terminally differentiated and consists of a long stalk on top of which sits the sorus that contains spores. The mature fruiting body measures between 1.5 to 3 mm in height. [DDB:pg, DDB_REF:5048]
comment [obo_vocabulary:comment]: Synonym from Kessin book p. 12-13.
exact_synonym [obo_vocabulary:exact_synonym]: sorocarp
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: whole organism [ddanat:0010082]
develops_from [obo_vocabulary:develops_from]: late culminant [ddanat:0000011]

subdivision [ddanat:0010085]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0010085
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: subdivision
type: Class
description: Anatomical structure which is a primary subdivision of whole Dictyostelium organism. The mereological sum of these is the whole organism. [DDB:pg]
x caro [obo_vocabulary:x-caro]: caro:0000032
subclass of: Dictyostelium discoideum anatomical structure [ddanat:0010001]

surface sheath of the loose aggregate [ddanat:0000014]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000014
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the loose aggregate
type: Class
description: Acellular material composed of polysaccharides and proteins, formed during late aggregation and that holds the cell mass together in the aggregate. [DDB:pg, PMID:4338436]
related_synonym [obo_vocabulary:related_synonym]: extracellular matrix (ECM)
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: loose aggregate [ddanat:0000004]
part_of [obo_vocabulary:part_of]: loose aggregate [ddanat:0000004]

surface sheath [ddanat:0000096]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000096
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath
type: Class
description: Acellular material composed of polysaccharides and proteins, formed during late aggregation and that holds the cell mass together throuhout development. [DDB:pg]
subclass of: acellular anatomical structure [ddanat:0010081]

surface sheath of the mound [ddanat:0000015]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000015
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the mound
type: Class
description: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the mound. [DDB:pg, PMID:4338436]
related_synonym [obo_vocabulary:related_synonym]: extracellular matrix (ECM)
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the loose aggregate [ddanat:0000014]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]

prestalk region of the tipped mound [ddanat:0000016]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000016
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk region of the tipped mound
type: Class
description: Elongated protusion of the tipped mound located on top of the cell mass that contains pstA cells flanked by pstO cells (expressing ecmA from the proximal and the distal part of its promoter, respectively). [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: apical tip of the tipped mound
exact_synonym [obo_vocabulary:exact_synonym]: pst region of the tipped mound
x pubmed [obo_vocabulary:x-pubmed]: pubmed:10642783
x pubmed [obo_vocabulary:x-pubmed]: pubmed:2513127
subclass of: prestalk region [ddanat:0000087]
develops_from [obo_vocabulary:develops_from]: mound [ddanat:0000005]
part_of [obo_vocabulary:part_of]: tipped mound [ddanat:0000006]

x pubmed [obo_vocabulary:x-pubmed]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: x-pubmed
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: x pubmed
type: ObjectProperty

pubmed:10642783
Bio2RDF namespace: pubmed
Bio2RDF identifier: 10642783
identifiers.org URI: http://identifiers.org/pubmed/10642783
type: pubmed resource [pubmed_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pubmed:2513127
Bio2RDF namespace: pubmed
Bio2RDF identifier: 2513127
identifiers.org URI: http://identifiers.org/pubmed/2513127
type: pubmed resource [pubmed_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

prestalk region [ddanat:0000087]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000087
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk region
type: Class
description: The prestalk region is located at the most apical part of the organism. It consists of about one quarter of the cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pst region
subclass of: subdivision [ddanat:0010085]

prespore region of the tipped mound [ddanat:0000017]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000017
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore region of the tipped mound
type: Class
description: Region of the tipped mound mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: psp region of the tipped mound
subclass of: prespore region [ddanat:0000086]
develops_from [obo_vocabulary:develops_from]: mound [ddanat:0000005]
part_of [obo_vocabulary:part_of]: tipped mound [ddanat:0000006]

prespore region [ddanat:0000086]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000086
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore region
type: Class
description: Region mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: psp region
subclass of: subdivision [ddanat:0010085]

surface sheath of the tipped mound [ddanat:0000018]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000018
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the tipped mound
type: Class
description: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the tipped mound. [DDB:pg, PMID:4338436]
related_synonym [obo_vocabulary:related_synonym]: extracellular matrix (ECM)
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the mound [ddanat:0000015]
part_of [obo_vocabulary:part_of]: tipped mound [ddanat:0000006]

prestalk region of the standing slug [ddanat:0000019]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000019
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk region of the standing slug
type: Class
description: Elongated protusion of the standing slug located on top of the cell mass that contains pstA cells flanked by pstO cells (expressing ecmA from the proximal and the distal part of its promoter, respectively). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pst region of the standing slug
x pubmed [obo_vocabulary:x-pubmed]: pubmed:10642783
x pubmed [obo_vocabulary:x-pubmed]: pubmed:2513127
subclass of: prestalk region [ddanat:0000087]
develops_from [obo_vocabulary:develops_from]: prestalk region of the tipped mound [ddanat:0000016]
part_of [obo_vocabulary:part_of]: standing slug [ddanat:0000007]

tip-organizer of the standing slug [ddanat:0000020]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000020
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: tip-organizer of the standing slug
type: Class
description: Part of the prestalk region of the standing slug that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: tip of the standing slug
subclass of: tip-organizer [ddanat:0000103]
develops_from [obo_vocabulary:develops_from]: tip-organizer of the tipped mound [ddanat:0000080]
part_of [obo_vocabulary:part_of]: prestalk region of the standing slug [ddanat:0000019]

tip-organizer [ddanat:0000103]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000103
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: tip-organizer
type: Class
description: Part of the prestalk region that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: tip
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: prestalk region [ddanat:0000087]

tip-organizer of the tipped mound [ddanat:0000080]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000080
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: tip-organizer of the tipped mound
type: Class
description: Part of the prestalk region of the tipped mound that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: tip of the tipped mound
subclass of: tip-organizer [ddanat:0000103]
develops_from [obo_vocabulary:develops_from]: apex of the mound [ddanat:0000109]
part_of [obo_vocabulary:part_of]: prestalk region of the tipped mound [ddanat:0000016]

prestalk A region of the standing slug [ddanat:0000021]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000021
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk A region of the standing slug
type: Class
description: Most apical region of the prestalk zone of the standing slug characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter). [DDB:pg]
comment [obo_vocabulary:comment]: See p. 146 Kessin book.
exact_synonym [obo_vocabulary:exact_synonym]: pstA region of the standing slug
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: prestalk A region [ddanat:0000088]
develops_from [obo_vocabulary:develops_from]: prestalk region of the tipped mound [ddanat:0000016]
part_of [obo_vocabulary:part_of]: prestalk region of the standing slug [ddanat:0000019]

prestalk A region [ddanat:0000088]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000088
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk A region
type: Class
description: Anterior-most region of the prestalk zone characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstA region
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: prestalk region [ddanat:0000087]

prestalk O region of the standing slug [ddanat:0000022]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000022
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk O region of the standing slug
type: Class
description: Area of the prestalk zone of the standing slug located posterior to the prestalk A region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter). [DDB:pg]
comment [obo_vocabulary:comment]: See p. 146 Kessin book.
exact_synonym [obo_vocabulary:exact_synonym]: pstO region of the standing slug
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: prestalk O region [ddanat:0000092]
develops_from [obo_vocabulary:develops_from]: prestalk region of the tipped mound [ddanat:0000016]
part_of [obo_vocabulary:part_of]: prestalk region of the standing slug [ddanat:0000019]

prestalk O region [ddanat:0000092]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000092
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk O region
type: Class
description: Area of the prestalk zone located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstO region
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: prestalk region [ddanat:0000087]

prestalk AB core region of the standing slug [ddanat:0000023]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000023
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk AB core region of the standing slug
type: Class
description: Cone-shaped area of the prestalk zone of the standing slug that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes. [DDB:pg]
comment [obo_vocabulary:comment]: See p. 146 Kessin book.
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB region of the standing slug
narrow_synonym [obo_vocabulary:narrow_synonym]: pstAB region
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: prestalk AB core region [ddanat:0000091]
develops_from [obo_vocabulary:develops_from]: prestalk region of the tipped mound [ddanat:0000016]
part_of [obo_vocabulary:part_of]: prestalk region of the standing slug [ddanat:0000019]

prestalk AB core region [ddanat:0000091]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000091
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk AB core region
type: Class
description: Cone-shaped area of the prestalk zone that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB region
exact_synonym [obo_vocabulary:exact_synonym]: pstAB region
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: prestalk region [ddanat:0000087]

prespore region of the standing slug [ddanat:0000024]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000024
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore region of the standing slug
type: Class
description: Region of the standing slug mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: psp region of the standing slug
subclass of: prespore region [ddanat:0000086]
develops_from [obo_vocabulary:develops_from]: prespore region of the tipped mound [ddanat:0000017]
part_of [obo_vocabulary:part_of]: standing slug [ddanat:0000007]

basal region of the standing slug [ddanat:0000025]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000025
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal region of the standing slug
type: Class
description: Region of the standing slug in contact with the substratum and composed of prestalk B cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: base of the standing slug
subclass of: basal region [ddanat:0000110]
develops_from [obo_vocabulary:develops_from]: tipped mound [ddanat:0000006]
part_of [obo_vocabulary:part_of]: standing slug [ddanat:0000007]

basal region [ddanat:0000110]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000110
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal region
type: Class
description: Region of the early pseudoplasmodium located at the closest to the substratum composed of pstB cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: base
subclass of: subdivision [ddanat:0010085]

peripheral layer of the standing slug [ddanat:0000026]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000026
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: peripheral layer of the standing slug
type: Class
description: Outer-most cell layer surrounding the standing slug. The peripheral layer is composed of electron-dense cells that are connected to each other, forming a coherent tissue. [DDB:pg, DDB_REF:1910]
subclass of: peripheral layer [ddanat:0000090]
develops_from [obo_vocabulary:develops_from]: standing slug [ddanat:0000007]
part_of [obo_vocabulary:part_of]: standing slug [ddanat:0000007]

peripheral layer [ddanat:0000090]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000090
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: peripheral layer
type: Class
description: Layer surrounding the pseudoplasmodium and composed of an electron-dense cell type. [DDB:pg]
subclass of: subdivision [ddanat:0010085]

surface sheath of the standing slug [ddanat:0000027]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000027
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the standing slug
type: Class
description: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the standing slug. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: extracellular matrix (ECM)
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the tipped mound [ddanat:0000018]
part_of [obo_vocabulary:part_of]: standing slug [ddanat:0000007]

prestalk region of the migratory slug [ddanat:0000028]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000028
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk region of the migratory slug
type: Class
description: The prestalk region of the migratory slug is located at the anterior of the organism. It consists of about one quarter of the cells. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: anterior region of the migratory slug
exact_synonym [obo_vocabulary:exact_synonym]: pst region of the migratory slug
subclass of: prestalk region [ddanat:0000087]
develops_from [obo_vocabulary:develops_from]: prestalk region of the standing slug [ddanat:0000019]
part_of [obo_vocabulary:part_of]: migratory slug [ddanat:0000008]

tip-organizer of the migratory slug [ddanat:0000029]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000029
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: tip-organizer of the migratory slug
type: Class
description: Part of the prestalk region of the migratory slug that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism. The tip guides the moveement of the organism during migration. [DDB:pg, DDB_REF:5053]
related_synonym [obo_vocabulary:related_synonym]: tip of the migratory slug
subclass of: tip-organizer [ddanat:0000103]
develops_from [obo_vocabulary:develops_from]: tip-organizer of the standing slug [ddanat:0000020]
part_of [obo_vocabulary:part_of]: prestalk region of the migratory slug [ddanat:0000028]

prestalk A region of the migratory slug [ddanat:0000030]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000030
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk A region of the migratory slug
type: Class
description: Anterior-most region of the prestalk zone of the migratory slug and characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter). [DDB:pg]
comment [obo_vocabulary:comment]: Synonym from Kessin book p. 175.
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AO region of the migratory slug
exact_synonym [obo_vocabulary:exact_synonym]: pstA region of the migratory slug
exact_synonym [obo_vocabulary:exact_synonym]: pstAO region of the migratory slug
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
x pubmed [obo_vocabulary:x-pubmed]: pubmed:10611970
subclass of: prestalk A region [ddanat:0000088]
develops_from [obo_vocabulary:develops_from]: prestalk A region of the standing slug [ddanat:0000021]
part_of [obo_vocabulary:part_of]: prestalk region of the migratory slug [ddanat:0000028]

pubmed:10611970
Bio2RDF namespace: pubmed
Bio2RDF identifier: 10611970
identifiers.org URI: http://identifiers.org/pubmed/10611970
type: pubmed resource [pubmed_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

prestalk O region of the migratory slug [ddanat:0000031]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000031
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk O region of the migratory slug
type: Class
description: Area of the prestalk zone of the migratory slug located posterior to the prestalk A region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter). [DDB:pg]
comment [obo_vocabulary:comment]: See p. 146 Kessin book.
exact_synonym [obo_vocabulary:exact_synonym]: pstO region of the migratory slug
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: prestalk O region [ddanat:0000092]
develops_from [obo_vocabulary:develops_from]: prestalk O region of the standing slug [ddanat:0000022]
part_of [obo_vocabulary:part_of]: prestalk region of the migratory slug [ddanat:0000028]

prestalk AB core region of the migratory slug [ddanat:0000032]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000032
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk AB core region of the migratory slug
type: Class
description: Cone-shaped area of the prestalk zone of the migratory slug that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes. [DDB:pg]
comment [obo_vocabulary:comment]: See Kessin book p. 146.
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB region of the migratory slug
exact_synonym [obo_vocabulary:exact_synonym]: pstAB region of the migratory slug
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
x pubmed [obo_vocabulary:x-pubmed]: pubmed:8223266
subclass of: prestalk AB core region [ddanat:0000091]
develops_from [obo_vocabulary:develops_from]: prestalk AB core region of the standing slug [ddanat:0000023]
part_of [obo_vocabulary:part_of]: prestalk region of the migratory slug [ddanat:0000028]

pubmed:8223266
Bio2RDF namespace: pubmed
Bio2RDF identifier: 8223266
identifiers.org URI: http://identifiers.org/pubmed/8223266
type: pubmed resource [pubmed_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

prespore region of the migratory slug [ddanat:0000033]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000033
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore region of the migratory slug
type: Class
description: Region of the migratory slug composed mostly of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism. [DDB:pg]
broad_synonym [obo_vocabulary:broad_synonym]: psp region of the migratory slug
subclass of: prespore region [ddanat:0000086]
develops_from [obo_vocabulary:develops_from]: prespore region of the standing slug [ddanat:0000024]
part_of [obo_vocabulary:part_of]: migratory slug [ddanat:0000008]

posterior region of the migratory slug [ddanat:0000034]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000034
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: posterior region of the migratory slug
type: Class
description: Region located at the very posterior of the migratory slug that contains pstB cells (rearguard cells). These cells form the basal disc in the mature fruiting body. [DDB:pg]
broad_synonym [obo_vocabulary:broad_synonym]: rearguard region
subclass of: posterior region [ddanat:0000108]
develops_from [obo_vocabulary:develops_from]: basal region of the standing slug [ddanat:0000025]
part_of [obo_vocabulary:part_of]: migratory slug [ddanat:0000008]

posterior region [ddanat:0000108]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000108
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: posterior region
type: Class
description: Region located at the very posterior of the organism that contains pstB cells (rearguard cells). These cells form the basal disc in the mature fruiting body. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: rearguard region
subclass of: subdivision [ddanat:0010085]

peripheral layer of the migratory slug [ddanat:0000035]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000035
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: peripheral layer of the migratory slug
type: Class
description: Outer-most cell layer surrounding the migratory slug. The peripheral layer is composed of electron-dense cells that are connected to each other, forming a coherent tissue. [DDB:pg, DDB_REF:1910]
subclass of: peripheral layer [ddanat:0000090]
develops_from [obo_vocabulary:develops_from]: peripheral layer of the standing slug [ddanat:0000026]
part_of [obo_vocabulary:part_of]: migratory slug [ddanat:0000008]

surface sheath of the migratory slug [ddanat:0000036]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000036
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the migratory slug
type: Class
description: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the migratory slug. [DDB:pg, PMID:4338436]
related_synonym [obo_vocabulary:related_synonym]: extracellular matrix (ECM)
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the standing slug [ddanat:0000027]
part_of [obo_vocabulary:part_of]: migratory slug [ddanat:0000008]

prestalk region of the early culminant [ddanat:0000037]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000037
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk region of the early culminant
type: Class
description: The prestalk region of the early culminant is located at the most apical part of the organism. It consists of about one quarter of the cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pst region of the early culminant
subclass of: prestalk region [ddanat:0000087]
develops_from [obo_vocabulary:develops_from]: prestalk region of the standing slug [ddanat:0000019]
part_of [obo_vocabulary:part_of]: early culminant [ddanat:0000009]

prestalk A region of the early culminant [ddanat:0000038]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000038
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk A region of the early culminant
type: Class
description: Anterior-most region of the prestalk zone of the early culminant characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstA region of the early culminant
subclass of: prestalk A region [ddanat:0000088]
develops_from [obo_vocabulary:develops_from]: prestalk A region of the standing slug [ddanat:0000021]
part_of [obo_vocabulary:part_of]: prestalk region of the early culminant [ddanat:0000037]

prestalk O region of the early culminant [ddanat:0000039]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000039
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk O region of the early culminant
type: Class
description: Area of the prestalk zone of the early culminant located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstO region of the early culminant
subclass of: prestalk O region [ddanat:0000092]
develops_from [obo_vocabulary:develops_from]: prestalk A region of the standing slug [ddanat:0000021]
part_of [obo_vocabulary:part_of]: prestalk region of the early culminant [ddanat:0000037]

prestalk AB core region of the early culminant [ddanat:0000040]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000040
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk AB core region of the early culminant
type: Class
description: Cone-shaped area of the prestalk zone of the early culminant that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB region of the early culminant
exact_synonym [obo_vocabulary:exact_synonym]: pstAB region of the early culminant
subclass of: prestalk AB core region [ddanat:0000091]
develops_from [obo_vocabulary:develops_from]: prestalk AB core region of the standing slug [ddanat:0000023]
part_of [obo_vocabulary:part_of]: prestalk region of the early culminant [ddanat:0000037]

prespore region of the early culminant [ddanat:0000041]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000041
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore region of the early culminant
type: Class
description: Region of the early culminant mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: psp region of the early culminant
subclass of: prespore region [ddanat:0000086]
develops_from [obo_vocabulary:develops_from]: prespore region of the standing slug [ddanat:0000024]
part_of [obo_vocabulary:part_of]: early culminant [ddanat:0000009]

upper cup region of the early culminant [ddanat:0000042]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000042
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: upper cup region of the early culminant
type: Class
description: Region of the prespore zone of the early culminant that borders the prestalk region. This region gives rise to the upper cup of the fruiting body. [DDB:pg, PMID:1879341, PMID:8016318]
related_synonym [obo_vocabulary:related_synonym]: prespore/anterior region of the early culminant
develops_from [obo_vocabulary:develops_from]: prespore region of the early culminant [ddanat:0000041]
part_of [obo_vocabulary:part_of]: prespore region of the early culminant [ddanat:0000041]
subclass of: obo vocabulary:Entity

obo vocabulary:Entity
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: Entity
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

stalk tube of the early culminant [ddanat:0000043]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000043
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk tube of the early culminant
type: Class
description: Open, cylindrical tube of the early culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate. [DDB:pg, DDB_REF:5053, ISBN:0521583640, PMID:11130075, PMID:9799430]
broad_synonym [obo_vocabulary:broad_synonym]: sorophore sheath
subclass of: stalk tube [ddanat:0000097]
develops_from [obo_vocabulary:develops_from]: early culminant [ddanat:0000009]
part_of [obo_vocabulary:part_of]: prespore region of the early culminant [ddanat:0000041]

stalk tube [ddanat:0000097]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000097
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk tube
type: Class
description: Open, cylindrical tube that appears during culmination. The stalk tube is composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate. [DDB:pg, DDB_REF:5053, ISBN:0521583640, PMID:11130075, PMID:9799430]
subclass of: acellular anatomical structure [ddanat:0010081]

prespore/base region of the early culminant [ddanat:0000044]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000044
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore/base region of the early culminant
type: Class
description: Region of the prespore zone of the early culminant that borders the base. This region gives rise to the lower cup of the fruiting body. [DDB:pg, PMID:1879341]
develops_from [obo_vocabulary:develops_from]: prespore region of the early culminant [ddanat:0000041]
part_of [obo_vocabulary:part_of]: prespore region of the early culminant [ddanat:0000041]
subclass of: obo vocabulary:Entity

basal region of the early culminant [ddanat:0000045]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000045
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal region of the early culminant
type: Class
description: Region of the early culminant located at the closest to the substratum composed of pstB cells that originated from rearguard cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: base of the early culminant
x pubmed [obo_vocabulary:x-pubmed]: pubmed:10611970
subclass of: basal region [ddanat:0000110]
develops_from [obo_vocabulary:develops_from]: basal region of the standing slug [ddanat:0000025]
part_of [obo_vocabulary:part_of]: early culminant [ddanat:0000009]

peripheral layer of the early culminant [ddanat:0000046]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000046
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: peripheral layer of the early culminant
type: Class
description: Layer surrounding the mexican hat and composed of an electron-dense cell type. [DDB:pg, DDB_REF:1910]
comment [obo_vocabulary:comment]: Kessin book p. 195.
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: peripheral layer [ddanat:0000090]
develops_from [obo_vocabulary:develops_from]: peripheral layer of the standing slug [ddanat:0000026]
part_of [obo_vocabulary:part_of]: early culminant [ddanat:0000009]

surface sheath of the early culminant [ddanat:0000047]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000047
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the early culminant
type: Class
description: Acellular material composed of polysaccharides and proteins that holds the cell mass together in the early culminant. [DDB:pg, PMID:4338436]
related_synonym [obo_vocabulary:related_synonym]: extracellular matrix (ECM)
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the standing slug [ddanat:0000027]
develops_from [obo_vocabulary:develops_from]: surface sheath of the migratory slug [ddanat:0000036]
part_of [obo_vocabulary:part_of]: early culminant [ddanat:0000009]

prestalk region of the mid culminant [ddanat:0000048]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000048
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk region of the mid culminant
type: Class
description: The prestalk region of the mid culminant is located at the most apical part of the organism. It consists of about one quarter of the cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pst region of the mid culminant
subclass of: prestalk region [ddanat:0000087]
develops_from [obo_vocabulary:develops_from]: prestalk region of the early culminant [ddanat:0000037]
part_of [obo_vocabulary:part_of]: mid culminant [ddanat:0000010]

prestalk A region of the mid culminant [ddanat:0000049]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000049
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk A region of the mid culminant
type: Class
description: Anterior-most region of the prestalk zone of the mid culminant characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstA region of the mid culminant
x pubmed [obo_vocabulary:x-pubmed]: pubmed:2513127
subclass of: prestalk A region [ddanat:0000088]
develops_from [obo_vocabulary:develops_from]: prestalk A region of the early culminant [ddanat:0000038]
part_of [obo_vocabulary:part_of]: prestalk region of the mid culminant [ddanat:0000048]

prestalk O region of the mid culminant [ddanat:0000050]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000050
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk O region of the mid culminant
type: Class
description: Area of the prestalk zone of the mid culminant located posterior to the prestalk A region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstO region of the mid culminant
subclass of: prestalk O region [ddanat:0000092]
develops_from [obo_vocabulary:develops_from]: prestalk O region of the early culminant [ddanat:0000039]
part_of [obo_vocabulary:part_of]: prestalk region of the mid culminant [ddanat:0000048]

prestalk AB core region of the mid culminant [ddanat:0000051]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000051
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk AB core region of the mid culminant
type: Class
description: Cone-shaped area of the prestalk zone of the mid culminant that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB region of the mid culminant
exact_synonym [obo_vocabulary:exact_synonym]: pstAB region of the mid culminant
subclass of: prestalk AB core region [ddanat:0000091]
develops_from [obo_vocabulary:develops_from]: prestalk AB core region of the early culminant [ddanat:0000040]
part_of [obo_vocabulary:part_of]: prestalk region of the mid culminant [ddanat:0000048]

stalk of the mid culminant [ddanat:0000052]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000052
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk of the mid culminant
type: Class
description: Tubular structure of the mid culminant that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. [DDB:pg]
comment [obo_vocabulary:comment]: Synonym from Kessin book p. 12-13; Kessin book p. 193.
exact_synonym [obo_vocabulary:exact_synonym]: sorophore of the mid culminant
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: stalk [ddanat:0000093]
develops_from [obo_vocabulary:develops_from]: prestalk AB core region of the early culminant [ddanat:0000040]
part_of [obo_vocabulary:part_of]: mid culminant [ddanat:0000010]

stalk [ddanat:0000093]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000093
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk
type: Class
description: Tubular structure that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: sorophore
subclass of: subdivision [ddanat:0010085]

stalk tube of the mid culminant [ddanat:0000053]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000053
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk tube of the mid culminant
type: Class
description: Open, cylindrical tube of the mid culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate. [DDB:pg, ISBN:0521583640, PMID:11130075, PMID:9799430]
broad_synonym [obo_vocabulary:broad_synonym]: sorophore sheath
subclass of: stalk tube [ddanat:0000097]
develops_from [obo_vocabulary:develops_from]: stalk tube of the early culminant [ddanat:0000043]
part_of [obo_vocabulary:part_of]: stalk of the mid culminant [ddanat:0000052]

prespore region of the mid culminant [ddanat:0000054]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000054
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore region of the mid culminant
type: Class
description: Region of the mid culminant mostly composed of prespore cells. In addition to prespore cells, the prespore region contains anterior-like cells (ALC) that express ecmA and/or ecmB. The prespore region occupies about three quarters of the organism. [DDB:pg]
broad_synonym [obo_vocabulary:broad_synonym]: psp region of the mid culminant
subclass of: prespore region [ddanat:0000086]
develops_from [obo_vocabulary:develops_from]: prespore region of the early culminant [ddanat:0000041]
part_of [obo_vocabulary:part_of]: mid culminant [ddanat:0000010]

upper cup region of the mid culminant [ddanat:0000055]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000055
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: upper cup region of the mid culminant
type: Class
description: Region of the prespore zone of the mid culminant that borders the prestalk region. [DDB:pg, PMID:8016318]
related_synonym [obo_vocabulary:related_synonym]: prespore/anterior region of the mid culminant
develops_from [obo_vocabulary:develops_from]: upper cup region of the early culminant [ddanat:0000042]
part_of [obo_vocabulary:part_of]: prespore region of the mid culminant [ddanat:0000054]
subclass of: obo vocabulary:Entity

prespore/base region of the mid culminant [ddanat:0000056]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000056
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore/base region of the mid culminant
type: Class
description: Region of the prespore zone of the mid culminant that borders the base. [DDB:pg]
develops_from [obo_vocabulary:develops_from]: prespore/base region of the early culminant [ddanat:0000044]
part_of [obo_vocabulary:part_of]: prespore region of the mid culminant [ddanat:0000054]
subclass of: obo vocabulary:Entity

basal disc of the mid culminant [ddanat:0000057]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000057
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal disc of the mid culminant
type: Class
description: Region located of the mid culminant located closest to the substratum and composed of pst cells (rearguard cells). [DDB:pg, DDB_REF:5053]
x pubmed [obo_vocabulary:x-pubmed]: pubmed:10611970
subclass of: basal disc [ddanat:0000089]
develops_from [obo_vocabulary:develops_from]: basal region of the early culminant [ddanat:0000045]
part_of [obo_vocabulary:part_of]: mid culminant [ddanat:0000010]

basal disc [ddanat:0000089]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000089
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal disc
type: Class
description: Conical-shaped structure that anchors the stalk to the substratum. Composed of anterior-like cells. [DDB:pg]
subclass of: subdivision [ddanat:0010085]

peripheral layer of the mid culminant [ddanat:0000058]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000058
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: peripheral layer of the mid culminant
type: Class
description: Layer surrounding the mid culminant and composed of an electron-dense cell type. [DDB:pg, DDB_REF:1910]
comment [obo_vocabulary:comment]: Kessin book p. 195.
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: peripheral layer [ddanat:0000090]
develops_from [obo_vocabulary:develops_from]: peripheral layer of the early culminant [ddanat:0000046]
part_of [obo_vocabulary:part_of]: mid culminant [ddanat:0000010]

stalk of the late culminant [ddanat:0000059]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000059
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk of the late culminant
type: Class
description: Tubular structure of the late culminant that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. [DDB:pg]
comment [obo_vocabulary:comment]: Synonym from Kessin book p. 12-13, Kessin book p. 193.
exact_synonym [obo_vocabulary:exact_synonym]: sorophore of the late culminant
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: stalk [ddanat:0000093]
develops_from [obo_vocabulary:develops_from]: stalk of the mid culminant [ddanat:0000052]
part_of [obo_vocabulary:part_of]: late culminant [ddanat:0000011]

stalk tube of the late culminant [ddanat:0000060]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000060
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk tube of the late culminant
type: Class
description: Open, cylindrical tube of the late culminant composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate. [DDB:pg, ISBN:0521583640, PMID:11130075, PMID:9799430]
broad_synonym [obo_vocabulary:broad_synonym]: sorophore sheath
subclass of: stalk tube [ddanat:0000097]
develops_from [obo_vocabulary:develops_from]: stalk tube of the mid culminant [ddanat:0000053]
part_of [obo_vocabulary:part_of]: stalk of the late culminant [ddanat:0000059]

sorus of the late culminant [ddanat:0000061]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000061
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: sorus of the late culminant
type: Class
description: Ovoid structure of the late culminant supported by the stalk and that contains the spores. [DDB:pg, ISBN:0198529171]
exact_synonym [obo_vocabulary:exact_synonym]: spore head of the late culminant
subclass of: sorus [ddanat:0000094]
develops_from [obo_vocabulary:develops_from]: prespore region of the mid culminant [ddanat:0000054]
part_of [obo_vocabulary:part_of]: late culminant [ddanat:0000011]

sorus [ddanat:0000094]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000094
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: sorus
type: Class
description: Ovoid structure supported by the stalk and that contains the spores. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: spore head
subclass of: subdivision [ddanat:0010085]

apical disc of the late culminant [ddanat:0000062]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000062
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: apical disc of the late culminant
type: Class
description: Most apical structure of the late culminant. Composed of cells that express the prestalk markers ecmA, ecmB and staB. [DDB:pg, PMID:9203345]
comment [obo_vocabulary:comment]: Kessin book p. 193.
x isbn [obo_vocabulary:x-isbn]: isbn:0521583640
subclass of: apical disc [ddanat:0000106]
part_of [obo_vocabulary:part_of]: sorus of the late culminant [ddanat:0000061]

apical disc [ddanat:0000106]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000106
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: apical disc
type: Class
description: Most apical structure of the organism. [DDB:pg]
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: sorus [ddanat:0000094]

upper cup of the late culminant [ddanat:0000063]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000063
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: upper cup of the late culminant
type: Class
description: Region of the late culminant located above the spore mass and composed of anterior-like cells. [DDB:pg, PMID:1879341, PMID:7128927]
x pubmed [obo_vocabulary:x-pubmed]: pubmed:1879341
subclass of: upper cup [ddanat:0000107]
develops_from [obo_vocabulary:develops_from]: upper cup region of the mid culminant [ddanat:0000055]
part_of [obo_vocabulary:part_of]: sorus of the late culminant [ddanat:0000061]

pubmed:1879341
Bio2RDF namespace: pubmed
Bio2RDF identifier: 1879341
identifiers.org URI: http://identifiers.org/pubmed/1879341
type: pubmed resource [pubmed_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

upper cup [ddanat:0000107]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000107
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: upper cup
type: Class
description: Region located above the spore mass and composed of anterior-like cells. [DDB:pg]
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: sorus [ddanat:0000094]

lower cup of the late culminant [ddanat:0000064]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000064
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: lower cup of the late culminant
type: Class
description: Region of the sorus of the late culminant located at the base of the sorus and composed of anterior-like cells. [DDB:pg, PMID:1879341, PMID:7128927]
subclass of: lower cup [ddanat:0000105]
develops_from [obo_vocabulary:develops_from]: prespore/base region of the mid culminant [ddanat:0000056]
part_of [obo_vocabulary:part_of]: sorus of the late culminant [ddanat:0000061]

lower cup [ddanat:0000105]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000105
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: lower cup
type: Class
description: Region located at the base of the sorus and composed of anterior-like cells. [DDB:pg]
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: sorus [ddanat:0000094]

basal disc of the late culminant [ddanat:0000065]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000065
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal disc of the late culminant
type: Class
description: Conical-shaped structure of the late culminant that anchors the stalk to the substratum. Composed of anterior-like cells. [DDB:pg, DDB_REF:5053]
subclass of: basal disc [ddanat:0000089]
develops_from [obo_vocabulary:develops_from]: basal disc of the mid culminant [ddanat:0000057]
part_of [obo_vocabulary:part_of]: late culminant [ddanat:0000011]

inner basal disc of the late culminant [ddanat:0000066]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000066
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: inner basal disc of the late culminant
type: Class
description: Central portion of the basal disc of the late culminant. Composed of stalk cells. [DDB:pg]
subclass of: inner basal disc [ddanat:0000098]
develops_from [obo_vocabulary:develops_from]: stalk of the mid culminant [ddanat:0000052]
part_of [obo_vocabulary:part_of]: basal disc of the late culminant [ddanat:0000065]

inner basal disc [ddanat:0000098]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000098
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: inner basal disc
type: Class
description: Central portion of the basal disc. Composed of stalk cells. [DDB:pg]
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: basal disc [ddanat:0000089]

outer basal disc of the late culminant [ddanat:0000067]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000067
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: outer basal disc of the late culminant
type: Class
description: Ring of cells at the periphery of the basal disc of the late culminant. Composed of pstB cells (rearguard cells) and other anterior-like cells. [DDB:pg]
subclass of: outer basal disc [ddanat:0000099]
develops_from [obo_vocabulary:develops_from]: basal disc of the mid culminant [ddanat:0000057]
part_of [obo_vocabulary:part_of]: basal disc of the late culminant [ddanat:0000065]

outer basal disc [ddanat:0000099]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000099
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: outer basal disc
type: Class
description: Ring of cells at the periphery of the basal disc composed of pstB cells (rearguard cells) and other anterior-like cells. [DDB:pg]
subclass of: subdivision [ddanat:0010085]
part_of [obo_vocabulary:part_of]: basal disc [ddanat:0000089]

stalk of the fruiting body [ddanat:0000068]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000068
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk of the fruiting body
type: Class
description: Tubular structure of the fruiting body that consists of cellulose-covered cells stacked on top of each other and surrounded by an acellular stalk tube composed of cellulose and glycoprotein. The stalk of the mature fruiting body is usually 5-15 microns in diameter and between 1.5 to 3 cm in height. [DDB:pg, DDB_REF:5048, PMID:565220]
exact_synonym [obo_vocabulary:exact_synonym]: sorophore of the fruiting body
subclass of: stalk [ddanat:0000093]
develops_from [obo_vocabulary:develops_from]: stalk of the late culminant [ddanat:0000059]
part_of [obo_vocabulary:part_of]: fruiting body [ddanat:0000012]

stalk tube of the fruiting body [ddanat:0000069]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000069
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk tube of the fruiting body
type: Class
description: Open, cylindrical tube of the fruiting body composed of cellulose and glycoprotein and surrounded by a ring of actin in which stalk cells accumulate. [DDB:pg, DDB_REF:5059, PMID:11130075]
broad_synonym [obo_vocabulary:broad_synonym]: sorophore sheath
subclass of: stalk tube [ddanat:0000097]
develops_from [obo_vocabulary:develops_from]: stalk tube of the late culminant [ddanat:0000060]
part_of [obo_vocabulary:part_of]: stalk of the fruiting body [ddanat:0000068]

sorus of the fruiting body [ddanat:0000070]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000070
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: sorus of the fruiting body
type: Class
description: Structure of the fruiting body supported by the stalk and that contains the spores. The sorus is 125-300 microns in diameter, lemon-shaped, and grayish white to pale yellow in color. [DDB:pg, DDB_REF:5048]
exact_synonym [obo_vocabulary:exact_synonym]: spore head of the fruiting body
subclass of: sorus [ddanat:0000094]
develops_from [obo_vocabulary:develops_from]: sorus of the late culminant [ddanat:0000061]
part_of [obo_vocabulary:part_of]: fruiting body [ddanat:0000012]

apical disc of the fruiting body [ddanat:0000071]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000071
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: apical disc of the fruiting body
type: Class
description: Region of the fruiting body located above the spore mass and composed of anterior-like cells. [DDB:pg, PMID:1879341, PMID:7128927]
related_synonym [obo_vocabulary:related_synonym]: upper cup of the fruiting body
subclass of: apical disc [ddanat:0000106]
develops_from [obo_vocabulary:develops_from]: upper cup of the late culminant [ddanat:0000063]
part_of [obo_vocabulary:part_of]: sorus of the fruiting body [ddanat:0000070]

lower cup of the fruiting body [ddanat:0000072]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000072
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: lower cup of the fruiting body
type: Class
description: Region of the fruiting body located at the base of the sorus and composed of anterior-like cells. [DDB:pg, PMID:1879341, PMID:7128927, PMID:8631253]
subclass of: lower cup [ddanat:0000105]
develops_from [obo_vocabulary:develops_from]: lower cup of the late culminant [ddanat:0000064]
part_of [obo_vocabulary:part_of]: sorus of the fruiting body [ddanat:0000070]

basal disc of the fruiting body [ddanat:0000073]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000073
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: basal disc of the fruiting body
type: Class
description: Conical-shaped structure of the fruiting body that anchors the stalk to the substratum, around 150 to 400 microns in diameter. Composed of anterior-like cells. [DDB:pg, DDB_REF:5048]
subclass of: basal disc [ddanat:0000089]
develops_from [obo_vocabulary:develops_from]: basal disc of the late culminant [ddanat:0000065]
part_of [obo_vocabulary:part_of]: fruiting body [ddanat:0000012]

inner basal disc of the fruiting body [ddanat:0000074]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000074
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: inner basal disc of the fruiting body
type: Class
description: Central portion of the basal disc of the fruiting body composed of stalk cells. [DDB:pg]
subclass of: inner basal disc [ddanat:0000098]
develops_from [obo_vocabulary:develops_from]: inner basal disc of the late culminant [ddanat:0000066]
part_of [obo_vocabulary:part_of]: basal disc of the fruiting body [ddanat:0000073]

outer basal disc of the fruiting body [ddanat:0000075]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000075
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: outer basal disc of the fruiting body
type: Class
description: Ring of cells at the periphery of the basal disc of the fruiting body composed of pstB cells (rearguard cells) and other anterior-like cells. [DDB:pg]
subclass of: outer basal disc [ddanat:0000099]
develops_from [obo_vocabulary:develops_from]: outer basal disc of the late culminant [ddanat:0000067]
part_of [obo_vocabulary:part_of]: basal disc of the fruiting body [ddanat:0000073]

slime trail [ddanat:0000076]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000076
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: slime trail
type: Class
description: Acellular material from the surface sheath left behind the migratory slug as it moves. Can be up to 2-3 cm in length. [DDB:pg, DDB_REF:5048]
exact_synonym [obo_vocabulary:exact_synonym]: slime track
subclass of: acellular anatomical structure [ddanat:0010081]
develops_from [obo_vocabulary:develops_from]: surface sheath of the migratory slug [ddanat:0000036]
part_of [obo_vocabulary:part_of]: migratory slug [ddanat:0000008]

acellular anatomical structure [ddanat:0010081]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0010081
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: acellular anatomical structure
type: Class
description: Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue. [CARO:MAH]
x caro [obo_vocabulary:x-caro]: caro:0000040
subclass of: Dictyostelium discoideum anatomical structure [ddanat:0010001]

surface sheath of the mid culminant [ddanat:0000077]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000077
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the mid culminant
type: Class
description: Acellular material composed of polysaccharides and proteins. Covers the basal disc of the mid culminant. [DDB:pg, DDB_REF:5059]
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the early culminant [ddanat:0000047]
part_of [obo_vocabulary:part_of]: mid culminant [ddanat:0000010]

surface sheath of the late culminant [ddanat:0000078]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000078
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the late culminant
type: Class
description: Acellular material composed of polysaccharides and proteins. In the late culminant, covers only the basal disc. [DDB:pg, DDB_REF:5059]
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the mid culminant [ddanat:0000077]
part_of [obo_vocabulary:part_of]: late culminant [ddanat:0000011]

surface sheath of the fruiting body [ddanat:0000079]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000079
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: surface sheath of the fruiting body
type: Class
description: Acellular material composed of polysaccharides and proteins. In the fruiting body, covers only the basal disc. [DDB:pg, DDB_REF:5059]
subclass of: surface sheath [ddanat:0000096]
develops_from [obo_vocabulary:develops_from]: surface sheath of the late culminant [ddanat:0000078]
part_of [obo_vocabulary:part_of]: fruiting body [ddanat:0000012]

apex of the mound [ddanat:0000109]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000109
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: apex of the mound
type: Class
description: Apical region of the mound where cAMP signals originate that trigger positive chemotaxis from pstA and pstO cells. [DDB:pg]
subclass of: apex [ddanat:0000111]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]

x caro [obo_vocabulary:x-caro]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: x-caro
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: x caro
type: ObjectProperty

caro:0000064
Bio2RDF namespace: caro
Bio2RDF identifier: 0000064
type: caro resource [caro_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

cell [ddanat:0000401]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000401
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: cell
type: Class
description: Anatomical structure that has as its parts a maximally connected cell compartment surrounded by a plasma membrane. [CARO:MAH]
subclass of: Dictyostelium discoideum anatomical structure [ddanat:0010001]

macrocyst [ddanat:0000084]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000084
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: macrocyst
type: Class
description: Unicellular diplopid organism resulting from the fusion of two cells of opposite mating types. [DDB:pg, DDB_REF:398]
subclass of: Dictyostelium discoideum single cell organism [ddanat:0000083]

peripheral layer cell [ddanat:0000095]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000095
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: peripheral layer cell
type: Class
description: Electron-dense cell connected to neighboring peripheral layer cells thus forming a coherent tissue around the multicellular organism. [DDB:pg, DDB_REF:1910]
subclass of: cell [ddanat:0000401]
part_of [obo_vocabulary:part_of]: peripheral layer of the standing slug [ddanat:0000026]
part_of [obo_vocabulary:part_of]: peripheral layer of the migratory slug [ddanat:0000035]
part_of [obo_vocabulary:part_of]: peripheral layer of the early culminant [ddanat:0000046]
part_of [obo_vocabulary:part_of]: peripheral layer of the mid culminant [ddanat:0000058]

prestalk A region of the tipped mound [ddanat:0000100]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000100
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk A region of the tipped mound
type: Class
description: Anterior-most region of the prestalk zone of the tipped mound characterized by high expression of the ecmA gene directed by the proximal part of its promoter (ecmA promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstA region of the tipped mound
subclass of: prestalk A region [ddanat:0000088]
part_of [obo_vocabulary:part_of]: prestalk region of the tipped mound [ddanat:0000016]

prestalk AB core region of the tipped mound [ddanat:0000101]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000101
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk AB core region of the tipped mound
type: Class
description: Cone-shaped area of the prestalk zone of the tipped mound that occupies a core among the pstA region. Cells of the pstAB region express both the ecmA and ecmB genes. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB region of the tipped mound
narrow_synonym [obo_vocabulary:narrow_synonym]: pstAB region
subclass of: prestalk AB core region [ddanat:0000091]
part_of [obo_vocabulary:part_of]: prestalk region of the tipped mound [ddanat:0000016]

prestalk O region of the tipped mound [ddanat:0000102]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000102
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk O region of the tipped mound
type: Class
description: Area of the prestalk zone of the tipped mound located posterior to the pstA region and characterized by low expression of the ecmA gene directed by the distal part of its promoter (ecmO promoter). [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: pstO region of the tipped mound
subclass of: prestalk O region [ddanat:0000092]
part_of [obo_vocabulary:part_of]: prestalk region of the tipped mound [ddanat:0000016]

tip-organizer of the early culminant [ddanat:0000104]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000104
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: tip-organizer of the early culminant
type: Class
description: Part of the prestalk region of the early culminant that acts as an organizer, that is, a signalling center that directs the morphological characteristics of the entire organism. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: tip of the early culminant
subclass of: tip-organizer [ddanat:0000103]
develops_from [obo_vocabulary:develops_from]: tip-organizer of the standing slug [ddanat:0000020]
develops_from [obo_vocabulary:develops_from]: tip-organizer of the migratory slug [ddanat:0000029]
part_of [obo_vocabulary:part_of]: prestalk region of the early culminant [ddanat:0000037]

apex [ddanat:0000111]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000111
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: apex
type: Class
description: Apical region of the early plasmodium where cAMP signals originate that trigger positive chemotaxis from pstA and pstO cells. [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: tip
subclass of: subdivision [ddanat:0010085]

Dictyostelium discoideum anatomical structure [ddanat:0010001]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0010001
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: Dictyostelium discoideum anatomical structure
type: Class
description: Material anatomical entity that has inherent 3D shape and is generated by coordinated expression of the Dictyostelium discoideum genome. [CARO:MAH]
subclass of: obo vocabulary:Entity

chemotactic amoeboid cell [ddanat:0000402]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000402
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: chemotactic amoeboid cell
type: Class
description: Starved cell that secretes and responds to chemoattractants (cAMP). [DDB:pg, DDB_REF:5048, PMID:4338436]
broad_synonym [obo_vocabulary:broad_synonym]: amoebae
exact_synonym [obo_vocabulary:exact_synonym]: chemotactic amoeboid cell (sensu Mycetozoa)
x cl [obo_vocabulary:x-cl]: cl:0000289
subclass of: Dictyostelium discoideum single cell organism [ddanat:0000083]
develops_from [obo_vocabulary:develops_from]: spore [ddanat:0000414]
part_of [obo_vocabulary:part_of]: stream [ddanat:0000013]

ddanat:0000001
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000001
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

cl:0000289
Bio2RDF namespace: cl
Bio2RDF identifier: 0000289
identifiers.org URI: http://identifiers.org/cl/0000289
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

aggregate cell [ddanat:0000403]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000403
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: aggregate cell
type: Class
description: Differentiating cell composing the aggregate that has acquired adhesive properties. [DDB:pg]
x cl [obo_vocabulary:x-cl]: cl:0000259
subclass of: cell [ddanat:0000401]
develops_from [obo_vocabulary:develops_from]: chemotactic amoeboid cell [ddanat:0000402]
part_of [obo_vocabulary:part_of]: aggregation territory [ddanat:0000003]
part_of [obo_vocabulary:part_of]: loose aggregate [ddanat:0000004]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]

cl:0000259
Bio2RDF namespace: cl
Bio2RDF identifier: 0000259
identifiers.org URI: http://identifiers.org/cl/0000259
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

anterior like cell [ddanat:0000404]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000404
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: anterior like cell
type: Class
description: Cell that has properties of anterior cells (for e.g., accumulate vital dyes in autophagic vesicles) but that is are scattered throughout the rear of the slug. Some but not all these cells express the ecmA gene and/or the ecmB gene. ALCs maintain an amoeboid appearance during culmination. ALCs that express the ecmO promoter have been called pstO/ALC. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: ALC
x cl [obo_vocabulary:x-cl]: cl:0000265
subclass of: cell [ddanat:0000401]
develops_from [obo_vocabulary:develops_from]: aggregate cell [ddanat:0000403]
part_of [obo_vocabulary:part_of]: prespore region of the migratory slug [ddanat:0000033]

cl:0000265
Bio2RDF namespace: cl
Bio2RDF identifier: 0000265
identifiers.org URI: http://identifiers.org/cl/0000265
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

prespore cell [ddanat:0000405]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000405
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prespore cell
type: Class
description: Cell that is undergoing differentiation to become a spore. Characterized by the presence of prespore vesicles (PV). [DDB:pg, DDB_REF:439, PMID:4330277]
exact_synonym [obo_vocabulary:exact_synonym]: psp cell
x cl [obo_vocabulary:x-cl]: cl:0000267
subclass of: cell [ddanat:0000401]
develops_from [obo_vocabulary:develops_from]: aggregate cell [ddanat:0000403]
part_of [obo_vocabulary:part_of]: loose aggregate [ddanat:0000004]
part_of [obo_vocabulary:part_of]: prespore region of the tipped mound [ddanat:0000017]
part_of [obo_vocabulary:part_of]: prespore region of the standing slug [ddanat:0000024]
part_of [obo_vocabulary:part_of]: prespore region of the migratory slug [ddanat:0000033]
part_of [obo_vocabulary:part_of]: prespore region of the early culminant [ddanat:0000041]
part_of [obo_vocabulary:part_of]: prespore region of the mid culminant [ddanat:0000054]
part_of [obo_vocabulary:part_of]: sorus of the late culminant [ddanat:0000061]

cl:0000267
Bio2RDF namespace: cl
Bio2RDF identifier: 0000267
identifiers.org URI: http://identifiers.org/cl/0000267
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

prestalk cell [ddanat:0000406]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000406
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: prestalk cell
type: Class
description: Cell that is undergoing differentiation to become a stalk cell and characterized by the ability to update vital dyes. Represents about one-quarter of the cells. During development, prestalk cells are located in the anterior portion of the organism. [DDB:pg, DDB_REF:448, DDB_REF:5059]
exact_synonym [obo_vocabulary:exact_synonym]: anterior cell
exact_synonym [obo_vocabulary:exact_synonym]: pst cell
x cl [obo_vocabulary:x-cl]: cl:0000269
subclass of: cell [ddanat:0000401]

cl:0000269
Bio2RDF namespace: cl
Bio2RDF identifier: 0000269
identifiers.org URI: http://identifiers.org/cl/0000269
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pstO cell [ddanat:0000407]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000407
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstO cell
type: Class
description: Cell that is undergoing differentiation to become a stalk cell. pstO cells express ecmA at a very low level and are located at the posterior half of the prestalk zone. Expresses ecmA from the distal region of its promoter (ecmO). [DDB:pg]
related_synonym [obo_vocabulary:related_synonym]: prestalk O cell
x cl [obo_vocabulary:x-cl]: cl:0000279
subclass of: prestalk cell [ddanat:0000406]
part_of [obo_vocabulary:part_of]: loose aggregate [ddanat:0000004]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]
part_of [obo_vocabulary:part_of]: prestalk O region of the standing slug [ddanat:0000022]
part_of [obo_vocabulary:part_of]: prestalk O region of the migratory slug [ddanat:0000031]
part_of [obo_vocabulary:part_of]: prestalk O region of the early culminant [ddanat:0000039]
part_of [obo_vocabulary:part_of]: prestalk O region of the mid culminant [ddanat:0000050]
part_of [obo_vocabulary:part_of]: prestalk O region of the tipped mound [ddanat:0000102]

cl:0000279
Bio2RDF namespace: cl
Bio2RDF identifier: 0000279
identifiers.org URI: http://identifiers.org/cl/0000279
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pstA cell [ddanat:0000408]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000408
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstA cell
type: Class
description: Cell that is undergoing differentiation to become a stalk cell. pstA cells express the ecmA marker from a promoter region that is proximal to the ATG (ecmAO promoter). They are located at the anterior-most region of the slug. During culmination pstA cells differentiate into pstAB cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk A cell
exact_synonym [obo_vocabulary:exact_synonym]: pstAO cell
x cl [obo_vocabulary:x-cl]: cl:0000271
subclass of: prestalk cell [ddanat:0000406]
part_of [obo_vocabulary:part_of]: loose aggregate [ddanat:0000004]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]
part_of [obo_vocabulary:part_of]: prestalk A region of the standing slug [ddanat:0000021]
part_of [obo_vocabulary:part_of]: prestalk A region of the migratory slug [ddanat:0000030]
part_of [obo_vocabulary:part_of]: prestalk A region of the early culminant [ddanat:0000038]
part_of [obo_vocabulary:part_of]: prestalk A region of the mid culminant [ddanat:0000049]
part_of [obo_vocabulary:part_of]: prestalk A region of the tipped mound [ddanat:0000100]

cl:0000271
Bio2RDF namespace: cl
Bio2RDF identifier: 0000271
identifiers.org URI: http://identifiers.org/cl/0000271
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

rearguard cell [ddanat:0000409]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000409
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: rearguard cell
type: Class
description: Cell expressing ecmB but not ecmA. Rearguard cells are located at the very rear of the slug (rearguard region). These cells form the outer basal disc of the fruiting body. If a migratory slug is formed, these cells are left behind. [DDB:pg, PMID:8631253]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk B cell
related_synonym [obo_vocabulary:related_synonym]: pstB cell
x cl [obo_vocabulary:x-cl]: cl:0000275
subclass of: anterior like cell [ddanat:0000404]
part_of [obo_vocabulary:part_of]: basal region of the standing slug [ddanat:0000025]
part_of [obo_vocabulary:part_of]: posterior region of the migratory slug [ddanat:0000034]
part_of [obo_vocabulary:part_of]: basal region of the early culminant [ddanat:0000045]
part_of [obo_vocabulary:part_of]: basal disc of the mid culminant [ddanat:0000057]
part_of [obo_vocabulary:part_of]: outer basal disc of the late culminant [ddanat:0000067]
part_of [obo_vocabulary:part_of]: lower cup of the fruiting body [ddanat:0000072]
part_of [obo_vocabulary:part_of]: outer basal disc of the fruiting body [ddanat:0000075]

cl:0000275
Bio2RDF namespace: cl
Bio2RDF identifier: 0000275
identifiers.org URI: http://identifiers.org/cl/0000275
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pstAB cell [ddanat:0000410]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000410
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstAB cell
type: Class
description: Cell that is undergoing differentiation to become a stalk cell. pstAB cells express both ecmA and ecmB either simultaneously or sequentially. During culmination pstA differentiate into pstAB cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB cell
x cl [obo_vocabulary:x-cl]: cl:0000273
subclass of: prestalk cell [ddanat:0000406]
develops_from [obo_vocabulary:develops_from]: pstA cell [ddanat:0000408]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]
part_of [obo_vocabulary:part_of]: prestalk AB core region of the standing slug [ddanat:0000023]
part_of [obo_vocabulary:part_of]: prestalk AB core region of the migratory slug [ddanat:0000032]
part_of [obo_vocabulary:part_of]: prestalk AB core region of the early culminant [ddanat:0000040]
part_of [obo_vocabulary:part_of]: prestalk AB core region of the mid culminant [ddanat:0000051]
part_of [obo_vocabulary:part_of]: prestalk AB core region of the tipped mound [ddanat:0000101]

cl:0000273
Bio2RDF namespace: cl
Bio2RDF identifier: 0000273
identifiers.org URI: http://identifiers.org/cl/0000273
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pstAB/ALC [ddanat:0000411]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000411
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstAB/ALC
type: Class
description: Anterior-like cell expressing both ecmA and ecmB. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk AB/anterior like cell
x cl [obo_vocabulary:x-cl]: cl:0000281
subclass of: anterior like cell [ddanat:0000404]

cl:0000281
Bio2RDF namespace: cl
Bio2RDF identifier: 0000281
identifiers.org URI: http://identifiers.org/cl/0000281
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pstO/ALC [ddanat:0000412]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000412
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstO/ALC
type: Class
description: Anterior-like cell that expresses the ecmO promoter and that can move to the position normally occupied by the pstO cells. [DDB:pg, PMID:8205618]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk O/anterior like cell
x cl [obo_vocabulary:x-cl]: cl:0000283
subclass of: anterior like cell [ddanat:0000404]

cl:0000283
Bio2RDF namespace: cl
Bio2RDF identifier: 0000283
identifiers.org URI: http://identifiers.org/cl/0000283
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

stalk cell [ddanat:0000413]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000413
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: stalk cell
type: Class
description: Cell of polyhedric shape filling the stalk tube. Stack cells are large (around 8 icrons in diameter), highly vacuolated, and are surrounded by cell wall composed of cellulose. Stalk cells die upon terminal differentiation. Their role is to provide structural support for the fruiting body. [DDB:pg, DDB_REF:5059]
x cl [obo_vocabulary:x-cl]: cl:0000285
subclass of: cell [ddanat:0000401]
develops_from [obo_vocabulary:develops_from]: pstAB cell [ddanat:0000410]
part_of [obo_vocabulary:part_of]: stalk of the mid culminant [ddanat:0000052]
part_of [obo_vocabulary:part_of]: stalk of the late culminant [ddanat:0000059]
part_of [obo_vocabulary:part_of]: inner basal disc of the late culminant [ddanat:0000066]
part_of [obo_vocabulary:part_of]: stalk of the fruiting body [ddanat:0000068]
part_of [obo_vocabulary:part_of]: inner basal disc of the fruiting body [ddanat:0000074]

cl:0000285
Bio2RDF namespace: cl
Bio2RDF identifier: 0000285
identifiers.org URI: http://identifiers.org/cl/0000285
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

cl:0000291
Bio2RDF namespace: cl
Bio2RDF identifier: 0000291
identifiers.org URI: http://identifiers.org/cl/0000291
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

aspidocyte [ddanat:0000415]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000415
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: aspidocyte
type: Class
description: Cell type formed in the presence of toxins. The membrane of the aspidocyte is highly resistant to detergents. [DDB:pg, PMID:17259634]
subclass of: Dictyostelium discoideum single cell organism [ddanat:0000083]
develops_from [obo_vocabulary:develops_from]: spore [ddanat:0000414]

pstB cell [ddanat:0000417]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000417
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstB cell
type: Class
description: Cell that is undergoing differentiation to become a stalk cell. pstB cells express the ecmB marker and form the outer basal disc in the fruiting body. [DDB:pg, PMID:8631253, PMID:8631254]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk B cell
subclass of: prestalk cell [ddanat:0000406]
part_of [obo_vocabulary:part_of]: loose aggregate [ddanat:0000004]
part_of [obo_vocabulary:part_of]: mound [ddanat:0000005]

sentinel cell [ddanat:0000418]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000418
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: sentinel cell
type: Class
description: Cell present in multicellular organism that has a high ability to engulf bacteria and toxin and is presumed to have a detoxification and immune-like role. [PMID:17673666]
exact_synonym [obo_vocabulary:exact_synonym]: S cell
subclass of: cell [ddanat:0000401]

pstI cell [ddanat:0000430]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000430
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstI cell
type: Class
description: Initial population of prestalk cells that activate the ecmA promoter at the mound stage and that presumably further differentiate into pstA and pstO cells. [DDB:pg]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk I cell
x cl [obo_vocabulary:x-cl]: cl:0000277
type: DeprecatedClass
subclass of: DeprecatedClass

cl:0000277
Bio2RDF namespace: cl
Bio2RDF identifier: 0000277
identifiers.org URI: http://identifiers.org/cl/0000277
type: cl resource [cl_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

pstU/ALC [ddanat:0001000]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0001000
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstU/ALC
type: Class
description: Anterior-like cell that expresses the rtaA promoter but not ecmA, ecmB or the ecmO promoter. [DDB:pf, PMID:20080085]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk U/anterior like cell
subclass of: anterior like cell [ddanat:0000404]
created_by [obo_vocabulary:created_by]: pfey
creation_date [obo_vocabulary:creation_date]: 2013-01-15T14:53:33Z

created_by [obo_vocabulary:created_by]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: created_by
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: created_by
type: DatatypeProperty

creation_date [obo_vocabulary:creation_date]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: creation_date
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: creation_date
type: DatatypeProperty

pstU cell [ddanat:0001001]
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0001001
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: pstU cell
type: Class
description: Cell that is undergoing differentiation to become a stalk cell. pstU cells express the rtaA marker and preferentially populate the upper cup region during culmination. [DDB:pf, PMID:20080085]
exact_synonym [obo_vocabulary:exact_synonym]: prestalk U cell
subclass of: prestalk cell [ddanat:0000406]
created_by [obo_vocabulary:created_by]: pfey
creation_date [obo_vocabulary:creation_date]: 2013-01-15T15:06:40Z

ddanat:0000081
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000081
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

caro:0000040
Bio2RDF namespace: caro
Bio2RDF identifier: 0000040
type: caro resource [caro_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

ddanat:0000082
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000082
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

caro:0000012
Bio2RDF namespace: caro
Bio2RDF identifier: 0000012
type: caro resource [caro_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

ddanat:0000085
Bio2RDF namespace: ddanat
Bio2RDF identifier: 0000085
type: ddanat resource [ddanat_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

caro:0000032
Bio2RDF namespace: caro
Bio2RDF identifier: 0000032
type: caro resource [caro_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3

develops_from [obo:develops_from]
Bio2RDF namespace: obo
Bio2RDF identifier: develops_from
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: develops_from
type: Class

part of [obo:part_of]
Bio2RDF namespace: obo
Bio2RDF identifier: part_of
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: part of
type: Class
is_transitive [obo_vocabulary:is_transitive]: true

is_transitive [obo_vocabulary:is_transitive]
Bio2RDF namespace: obo_vocabulary
Bio2RDF identifier: is_transitive
type: obo_vocabulary resource [obo_vocabulary:Resource]
in dataset: bioportal resource:bio2rdf.dataset.bioportal.R3
title: is_transitive
type: DatatypeProperty